FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008984

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008984
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences907096
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCCCGC6450.0093160298.6975921
ATCCATT10107.515517E-47.6099396
CAAAGAT14658.112262E-46.2226371
CTTTCAT14800.0061579195.6857571
CAAAAAG22501.6041432E-45.2982831
Produced by FastQC (version 0.11.5)