FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008987

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008987
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences771183
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCCAAT5008.8381453E-411.556831
CCTCCGT5800.00304456229.9627841
GTTCTGT7300.00200560278.9050911
CTTCCAC10105.267051E-47.8666541
CCTCCAG11100.00144082257.15794661
AAAAGTT12550.00545827956.30547573
CAAAAAG17850.0059849455.26046231
CCCCCTC4150.00120992385.199115385-89
AAAAAGT18500.0094466635.05883462
Produced by FastQC (version 0.11.5)