FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008991

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008991
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences496429
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATGTAAC2857.8692865E-620.105616
TGTAACT3050.00568510314.0889867
CTGCGAA4806.5453065E-411.97631551
ACGCAGA4550.00612867511.0183115
AAATGAA10500.0072191146.82085944
CTTTTTT17800.00100074325.65174441
Produced by FastQC (version 0.11.5)