FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009003

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009003
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences490531
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACGGAT3457.550616E-414.5609981
ATGCCAA6400.00804256410.6212845145
TTTTACC7900.00443706158.1557487
GCCGCCA8150.0058715327.90557247
TTCCGCA8450.0081165017.62490138
Produced by FastQC (version 0.11.5)