FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009008

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009008
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1273014
Sequences flagged as poor quality0
Sequence length100-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTGGGTT4100.002787440312.2466121
GTTAAAA9300.00218388357.7129191
CCACAAT10050.0046614957.13732861
CGAATTT12206.103007E-46.98358353
CTTCAAT13850.0022859836.2148871
ATTTCCC16450.00283067355.6060756
ATATTAT19154.9529976E-45.55653336
AAAATAT33402.327215E-85.5269283
CAAAAGA20550.00109940365.23577741
Produced by FastQC (version 0.11.5)