FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009016

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009016
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences568625
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTCAGC3655.9963793E-515.8767691
CGTAGCC3100.00608707713.9450064
AGCGGGT3200.00751084413.5092246
CCCGGAT6600.0086131448.7803351
CCAAAAT8050.0047291558.0986321
GTTCATC8100.0052065478.0125122
CTTTTTT22751.1589334E-45.41293141
Produced by FastQC (version 0.11.5)