FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009019

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009019
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences570742
Sequences flagged as poor quality0
Sequence length100-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGATCCT2450.003140977621.26271145
CAAGTGA2800.00368541615.0397265
TCCTGGG3000.005807066314.044462
ACCGATT4600.007697230710.6860032
ACCGACA5900.004424129.5216682
ACAGTCA2501.15424686E-47.301199460-64
CCCCCCC4454.2029278E-56.1844487140-144
CAAAAAA14400.00423672665.87968971
Produced by FastQC (version 0.11.5)