FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009023

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009023
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1244071
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTCGAAC8509.836316E-59.188162
CCTCTGT7350.00237958558.7398461
CTGGAGT6500.0090084538.7338249
TCGAAGA11402.8032067E-47.4736232
GGTGAAT12155.482119E-47.04942271
CCAAAAT14154.302515E-46.55745841
GAACAAG17200.0047670285.36407765
Produced by FastQC (version 0.11.5)