FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009025

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009025
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1394357
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAGAA8400.0068866937.76821761
CTCCGAT11251.8889806E-47.73369261
TTAAGAT8550.0083747447.6001873
TCCGATT14104.5661807E-57.1754022
CCGATTC12650.005716056.27841473
GTCTGTT13300.0092014725.99651861
Produced by FastQC (version 0.11.5)