FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009033

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009033
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences462138
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACACGTC1801.7573415E-423.6517878
CACACGT1953.0235096E-421.8300577
GCACACG2507.04618E-519.865356
CACGTCT2206.8168895E-419.3514619
CGACGAC2000.00896046217.7369213
AGCACAC3303.0193063E-517.1994385
GTAAGTG2700.002688729415.7678588
AGAGCAC3000.00542248314.1895373
GAGCACA3950.002284489312.5730084
TTACCTT7000.00160885979.1218444
CATCATT9150.001963937.79432631
Produced by FastQC (version 0.11.5)