FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005009034

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009034
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences513740
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GAAGAGCACACGTCTGAACTCCAGTCACTGACTTCGATCTCGTATGCCGT5410.10530618600848678TruSeq Adapter, Index 4 (96% over 32bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)