FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009035

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009035
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1496701
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACGAAT8950.00146097618.0345581
CTCCAAG12105.72095E-57.7257921
GTGGAAC12550.0054906646.3028071
AAGAGTT12950.0078866986.08669144
CAGCAAT18250.0081853855.12230631
CTTTAAT18250.0081853855.12230631
AAATGTT21000.00148741385.1183544
CTGCAAT22506.410179E-45.11354971
Produced by FastQC (version 0.11.5)