FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009036

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009036
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences589474
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGGAG2358.705666E-418.6615431
TTAGGTA2900.003845603714.9439539
CTCACTT3100.005534718314.1466541
CTTCTGT9200.00162873657.94467831
CTTCAAT10450.00566335076.9943581
TTTGATT13850.0021073326.2586492
Produced by FastQC (version 0.11.5)