FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009047

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009047
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences855757
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGTGATT8156.275116E-48.7483919
CCTCAAA8256.7583163E-48.6834471
TTAAATG7400.00255203558.6720532
CTTCAAC9302.3676273E-48.4733621
CAAAGAT18102.0139205E-45.93688631
CTTTTGT15400.00754256135.58221531
Produced by FastQC (version 0.11.5)