FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009048

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009048
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2634519
Sequences flagged as poor quality0
Sequence length100-151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACTCGT8450.00775015177.66687871
TCGTGGT13200.0093850015.98552664
CTCCGAT21653.6706106E-45.3197951
CTTCAAT40307.674316E-95.17995261
GTTAAAT27801.7129152E-55.17866751
CTCAAAC19700.0035295955.11557671
Produced by FastQC (version 0.11.5)