FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009059

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009059
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences512149
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCACAT3458.0265955E-414.4441351
CTTCGCT4250.003854878211.7252381
GTTTCGG6050.00486007439.4134151
CTCAAAA7150.00189268788.9608471
CCCAAAA6600.0099271588.6289631
CCCAGTC3300.00297223965.583635310-14
Produced by FastQC (version 0.11.5)