FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009060

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009060
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1235812
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTCGCT9051.564693E-48.8043621
CTCCCAA11000.00127166777.2435891
CGCATTT10900.0097220816.61538033
CTTCGAT13200.00119044196.58508061
CTTTTAA17650.00507906035.3352211
AATATAC17950.00652798455.22228055
CAATGAT18650.0096737785.049151
Produced by FastQC (version 0.11.5)