FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009061

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009061
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences880948
Sequences flagged as poor quality0
Sequence length100-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCTAAA1700.00360057520.7712961
CACGTCT3952.0329026E-819.558719
CACACGT4259.379419E-716.5246057
ACACGTC4751.674216E-716.2646128
GAGCACA5255.215261E-714.71476654
AGAGCAC5508.820989E-714.0459143
AGCACAC6657.4088257E-611.616925
GCACACG7151.6565387E-510.8045486
AACATAC6100.00582262459.2104355
GTTCAAG7900.0050227258.045591
AAGAGCA11554.258246E-57.91001462
GAAGAGC11200.00201064936.9361291
CTTTTGT11900.00380157986.52812151
Produced by FastQC (version 0.11.5)