FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009066

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009066
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1507953
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACCTAG502.2587388E-456.6500135
CTTCGAT14506.1209657E-46.3700461
TCGATAT14959.1333117E-46.1625153
GGAAGAT29501.9856725E-65.2986821
GTTTCTT27201.4679341E-55.22430231
GTTTGAT19550.00377153985.0880161
Produced by FastQC (version 0.11.5)