FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009068

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009068
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences877518
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTATGAT8100.0050055988.0486451
CTTCCGA8400.00709899387.7412884
CTCCGGG10406.989902E-47.66169071
CTTCTAT10608.5659465E-47.5171311
CTCCTCC11702.997937E-47.4295181
CTTCAAT14004.022246E-57.243781
GCTCTTC11400.00185404086.9896121
TTCAATT13852.8513433E-46.78177832
CAGAAAT15401.4040332E-46.58525471
CTTTCAT17050.00337357075.5231171
Produced by FastQC (version 0.11.5)