FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009069

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009069
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1645323
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGATCT12406.074514E-46.98676633
CCAACCT10400.0058601086.97143131
GGTAGAT11900.00289008846.7019471
GTGGATT15750.0012997865.98436551
GTCAAAG18200.00119063975.5771451
TGATTCA17300.0041742865.4251774
GATTCAA17850.0060391955.25737525
GTTTTAT27406.584563E-55.0275721
Produced by FastQC (version 0.11.5)