FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009072

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009072
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences883260
Sequences flagged as poor quality0
Sequence length100-151
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATAGCGC3600.001028819913.9797358
CAGGGCT5450.001887634410.553514
CTTGTAC6250.00563509769.2471551
GAGAATC8550.00865276257.5718352
CATCAAC15051.0773649E-46.72031641
TTTCAGT10800.009145796.65701687
CTCATTT11950.00313185236.650021
CATCAAT17601.7362587E-56.56758171
Produced by FastQC (version 0.11.5)