FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009086

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009086
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences731364
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTATTAA4500.00547519611.18761351
TAACTGC4700.007772078710.6727329
CCTCTGT5950.00389634389.6699661
TAATTTC9202.0984586E-48.5680164
CTCTGCT7900.004261498.19345951
CAAATAC10300.00576100456.98256061
GATATTC16650.00289215155.5950575
Produced by FastQC (version 0.11.5)