FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009087

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009087
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences567175
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT2051.5064887E-524.2628067
CACGTCT1902.5114356E-422.4385369
ACACGTC2054.1969924E-420.7966928
GAGCACA2600.002069943616.3988384
AGCACAC3200.00822840513.3240565
AGAGCAC3250.00911579613.1190693
CTGAAAG11400.00218345676.88109161
Produced by FastQC (version 0.11.5)