FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009088

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009088
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3206777
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCCAAG23505.570757E-65.8303241
CTCAAAT24007.949589E-65.70885941
CTCCGAG16500.00241871135.6815441
CTTTAAA44752.1827873E-115.47889331
CTCCGAT25701.4179853E-45.0506391
Produced by FastQC (version 0.11.5)