FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009103

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009103
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences730071
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCACCT3150.006488165413.81205751
CTTCAAT10004.5382764E-47.9764631
CAAAGAT11853.9635823E-57.9550451
CTTGAAA11500.00200971266.9360541
TCCATTT12556.8669353E-46.9107443
CTTTTAA11600.0022018326.8762611
CTGCTTT19200.00232667035.2874281
Produced by FastQC (version 0.11.5)