FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009104

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009104
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1485797
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAAAT10950.0094817666.6327811
GTAAGAA15258.633636E-46.1913211
CTAAAAA16750.00265341745.63687371
CTTCGCC18700.00164038845.43746141
CTTCAAT24054.4405402E-55.43584631
CTTTGAT26403.4625424E-55.22708371
Produced by FastQC (version 0.11.5)