FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009106

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009106
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences529901
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTACAAT4650.006391520610.9564761
CTCCGCT4800.00809133710.6140861
ACATCAG4900.009978916510.3179914
TCAAATT8851.2630536E-48.9772352
AACATTT7700.0032511068.4419933
CTTTTAT11652.695678E-47.49688961
CATTTTC13100.0081789456.06362875
Produced by FastQC (version 0.11.5)