FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009108

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009108
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1274349
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACCCCT4705.150245E-412.3253091
GTTTGAA13950.00222885566.2289191
CCCTGCA14250.00282932176.0977841
GGAGAAT14700.0040034145.9111171
TCGATCT15950.00163631225.87012153
TGGATTT21300.00167751875.07196333
Produced by FastQC (version 0.11.5)