FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009113

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009113
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3975530
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGAGT14153.612507E-46.65326261
GTCCCGT16904.7027093E-45.9991411
CCCCTAT14850.00448401465.85197541
CTCGCTT20101.1650576E-45.76463271
CCCCAAC20451.493362E-45.6659721
CCCACAT25902.6526737E-55.31253241
CTCAGAT19100.00222413755.30814031
CCCCTTT30251.2422584E-55.0273791
Produced by FastQC (version 0.11.5)