FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009115

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009115
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences487093
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGATTA2104.98858E-420.2699185
GGGGGGG1059.34645E-411.481779120-124
CAAAGAT7502.7825136E-49.4875411
CCTGCAT7904.682426E-49.0071591
GAAAGAA13402.2871385E-46.90324831
AGATGAC3800.00195464985.3627157105-109
Produced by FastQC (version 0.11.5)