FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009119

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009119
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences550067
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCAGGGG3050.00665986213.7568332
CTAAAAT3800.001878461712.9054191
CCAAGAT5100.001345561110.9894881
TTCAAAA11800.00385153256.5189512
CTTTTTT16250.0028299735.60463951
Produced by FastQC (version 0.11.5)