FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009120

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009120
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1542061
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CATTAAT13051.6330754E-47.0979651
CTCCAAT11450.00231342276.8452321
ATCCACG12300.00502359546.35687882
GTCTGAT14300.0035247265.97924231
AATATAC17901.9396574E-45.9542275
GATTGAT17150.0043985745.40107541
CTTCATT26555.2176707E-55.09905961
CAAGAAT19900.0045395425.01274871
Produced by FastQC (version 0.11.5)