FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009129

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009129
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences946752
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAACCCC3000.004882430714.4178979
CGAAGCA8850.00127452278.1457048
CCTTCGG9400.0021878657.71104051
CAAGGAG10300.0053442377.037261
CAGATTT16403.362232E-46.15625673
Produced by FastQC (version 0.11.5)