FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009145

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009145
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences789113
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTAAGAA7402.1545564E-49.733721
TGCAAGT7200.00189718718.959752
CTTCCAT13100.00116251116.5981241
AAGAATT17659.325986E-45.6844263
GAAGAAT17900.0067664695.2056652
AAAGATA22305.899028E-45.14281652
Produced by FastQC (version 0.11.5)