FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009153

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009153
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2182569
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTACAG10900.00118862337.29042531
ACATAAC12550.0055030596.3017516
CTCAAAG18552.518145E-45.841631
CGTTTAT19050.00221752265.3090861
CCCGCAC17950.00639464665.2319741
Produced by FastQC (version 0.11.5)