FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009166

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009166
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences655790
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACACGTC2950.005231078214.2678888
ATCACAG5750.00408135411.63577145
GCTGTAT8004.7660214E-610.5693131
GTTGCTC4700.00880530210.4943531
GTTACGG5800.00387568599.6759247
GCATATT11102.3584579E-47.5849894
Produced by FastQC (version 0.11.5)