FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009181

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009181
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences570051
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGAATT3900.002150689312.67528252
TATGGTT5501.8389766E-411.5457737
GTTTTTA8900.00158701957.9655361
GATTTTC12300.0054115426.310025
CCCCACA2500.0064094016.210149360-64
CGAGGCC3905.4234674E-45.519975100-104
CTTTTTT20500.00123955185.1873131
Produced by FastQC (version 0.11.5)