FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009193

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009193
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1299208
Sequences flagged as poor quality0
Sequence length100-151
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGTAA6150.00480611869.4281781
CTCGGCT6300.0058608929.2036971
CCTCAAA12054.9230926E-57.8193241
CTCAAAT11200.00152973467.11848451
ATTTGCG10150.004818877.1130446
CTTAAAG13350.00134387026.5149771
CTTTAAA26309.4047937E-75.7873061
AGATTTG15050.00537369875.7566034
CAACAAT20157.3570345E-45.39546781
AACAATT22154.7653622E-45.22199442
CTTTTAT30001.0490785E-55.0735381
CAACAAA24353.1917184E-45.06014351
Produced by FastQC (version 0.11.5)