FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009196

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009196
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences476884
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGAGCAC3200.00734367713.5546318
CTTTCAT9151.5071801E-610.295751
ATCCATT5950.00365634179.74336051
CTTTTAT8951.3757785E-48.9064651
AATATTC8400.0070525997.7455035
ATGAGTT2850.00290358466.08424660-64
Produced by FastQC (version 0.11.5)