FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009199

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009199
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences915438
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTCAAT11954.423593E-68.54711
CACCGCT8300.00584610977.9108481
TTGGATT8700.0098172417.4655052
TTCAATT12650.0057399446.27535252
CAATTTC14650.00399901865.9112534
CTTTTCC26207.7372897E-75.84758661
CTTTGCC19200.00215773075.31967931
Produced by FastQC (version 0.11.5)