FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009216

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009216
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1082680
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTACCT5750.002768178510.0785361
CTTTAAT15702.4224788E-56.92096951
GTTTGAT12250.003948846.50476931
GATTATG15450.00705473875.61649135
TTTCCCT15450.0070655415.6157138
CTTTGAA19000.00206954785.33764551
Produced by FastQC (version 0.11.5)