FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009220

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009220
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences706971
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCAGTT4350.00477134411.3959711
CTCCGCT5850.0038479979.6844891
GATCTTG5850.00421238929.57899955
GGTGAAC6350.00755864348.9219311
CAAAGAT11850.00353148496.57380631
AAGATTT13950.00319424166.03104543
ATTATAA16600.00365381155.48556475
Produced by FastQC (version 0.11.5)