FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009221

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009221
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1162797
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCGAAAT13352.4082326E-57.53061961
CCCAGAT11150.00160914327.0843791
CCTCATC13602.526374E-46.84970662
CCCCCCC2550.00626475836.2240696100-104
AATATTC25051.0499501E-45.147345
Produced by FastQC (version 0.11.5)