FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009238

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009238
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1716721
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAGAA11151.7302473E-47.7928261
ACCAATC10750.00104511887.3790042
CCCTCAT10100.00446600057.16914271
CCAATGT10400.0061941796.93171933
CACCAAT15057.6395925E-46.25454141
CTCAAAC14000.00232256766.20642951
CCATCGT17800.0056388295.28824951
GTTTGAT19550.00297905925.1852521
Produced by FastQC (version 0.11.5)