FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009241

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009241
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2155016
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCAAAC13001.306611E-47.2279951
CGATTTG16102.73911E-46.25590134
GTCTGGT16000.0016292665.8727461
CCCAGAT18800.00186561965.38254931
CTGCGAT17550.004878025.354071
Produced by FastQC (version 0.11.5)