FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009247

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009247
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1054419
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACGGGA5200.001403980210.9354111
CCTAAAT4700.0082587910.586411
ATACGGC10157.60321E-58.3629192
GAATTGT10500.00815975856.7364766
AAATTGT15100.00105308596.08959636
GGATAAT12950.0085685716.03769831
GAAATTG15300.0080813865.5476865
AAATTTC16850.00389062825.4571455
TATTATT26600.0081096755.125403145
Produced by FastQC (version 0.11.5)