FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009251

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009251
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1028160
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCCTTT8457.8278943E-48.5564861
TTACTGC8250.00627839247.8483999
GTAATAT11550.00217158636.88593441
GCAAGCT13200.00128536866.5403338
ATTTCCA16600.00266622385.6341426
AATATTG18050.00118033985.5803895
Produced by FastQC (version 0.11.5)