FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009255

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009255
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences564035
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCAAGG2851.6617717E-417.7641331
CTATGTA2800.003146996715.4007497
ATCAATT7450.00238168178.7372981
CCTTGAA7650.00302774188.5088711
CAAAGAA13752.5715752E-46.8380381
CTCTTTT14250.0028591056.0905611
AGAAAAT19900.00375491755.08821961
Produced by FastQC (version 0.11.5)