FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009256

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009256
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences633755
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCATAT6400.0090899118.7230171
GTGGAAA10451.2476649E-48.013491
CCCTCCC2050.00525208058.006878140-144
CATAAAT9800.0047597637.12083051
CTTTAAT9950.0055167877.0134811
CAAGAAA12106.750441E-46.92074061
Produced by FastQC (version 0.11.5)